Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yip1 family protein | SWIT_RS16280 | Not Available | Positive | 3542441 - 3543061 | 21532.2 |
| tonb-dependent receptor | SWIT_RS16285 | Not Available | Negative | 3543123 - 3545534 | 86465.1 |
| anthranilate phosphoribosyltransferase | SWIT_RS16290 | Not Available | Negative | 3545952 - 3546950 | 34013.6 |
| anthranilate synthase component ii | SWIT_RS16295 | Not Available | Negative | 3546947 - 3547540 | 20937.3 |
| coce/nond family hydrolase | SWIT_RS16300 | Not Available | Positive | 3547727 - 3549610 | 69592.7 |
| dha2 family efflux mfs transporter permease subunit | SWIT_RS16305 | Not Available | Negative | 3549624 - 3551171 | 54921.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | SWIT_RS16310 | Not Available | Negative | 3551168 - 3552355 | 41528.4 |
| efflux transporter outer membrane subunit | SWIT_RS16315 | Not Available | Negative | 3552359 - 3553822 | 50075.8 |
| ohr family peroxiredoxin | SWIT_RS16320 | Not Available | Positive | 3554128 - 3554541 | 14067.6 |
| lysr family transcriptional regulator | SWIT_RS16325 | Not Available | Negative | 3554566 - 3555492 | 33929.9 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
