Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type b 50s ribosomal protein l36 | SWIT_RS15740 | Not Available | Positive | 3424806 - 3424931 | 5096.3 |
| had-ia family hydrolase | SWIT_RS15745 | Not Available | Positive | 3424988 - 3425569 | 21108.1 |
| hypothetical protein | SWIT_RS15750 | Not Available | Positive | 3426028 - 3426396 | 11573.6 |
| s10 family peptidase | SWIT_RS15755 | Not Available | Negative | 3426449 - 3428056 | 57969.7 |
| amidase | SWIT_RS15760 | Not Available | Positive | 3428213 - 3429778 | 55268.4 |
| pyruvate kinase | SWIT_RS15765 | Not Available | Negative | 3429929 - 3431386 | 52292.5 |
| duf2312 domain-containing protein | SWIT_RS15770 | Not Available | Positive | 3431579 - 3431842 | 9947.12 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SWIT_RS15775 | Not Available | Positive | 3432055 - 3432912 | 30336.8 |
| tetratricopeptide repeat protein | SWIT_RS15780 | Not Available | Positive | 3433004 - 3433711 | 25124.2 |
| pqq-like beta-propeller repeat protein | SWIT_RS15785 | Not Available | Positive | 3433716 - 3435050 | 46354.6 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
