Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SWIT_RS15590 | Not Available | Positive | 3385430 - 3386392 | 34768.3 |
| cupin domain-containing protein | SWIT_RS15595 | Not Available | Positive | 3386506 - 3387606 | 40452.8 |
| 4-hydroxy-2-oxoheptanedioate aldolase | SWIT_RS15600 | Not Available | Negative | 3387609 - 3388400 | 27798.5 |
| 2-oxo-hept-4-ene-1,7-dioate hydratase | SWIT_RS15605 | Not Available | Negative | 3388444 - 3389244 | 28764.4 |
| nuclear transport factor 2 family protein | SWIT_RS27305 | Not Available | Positive | 3389380 - 3389766 | 13904.4 |
| acyl-coa dehydrogenase family protein | SWIT_RS15615 | Not Available | Positive | 3389934 - 3391148 | 42969.3 |
| tonb-dependent receptor | SWIT_RS15620 | Not Available | Positive | 3391484 - 3393823 | 82949.1 |
| serine/threonine protein phosphatase | SWIT_RS15625 | Not Available | Positive | 3393917 - 3395203 | 47330.9 |
| 3-keto-5-aminohexanoate cleavage protein | SWIT_RS15630 | Not Available | Positive | 3395241 - 3396173 | 33668.4 |
| voc family protein | SWIT_RS15635 | Not Available | Positive | 3396291 - 3396986 | 25255.4 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
