Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | SWIT_RS15440 | Not Available | Positive | 3353287 - 3354120 | 30195.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | SWIT_RS15445 | Not Available | Positive | 3354158 - 3355420 | 48100.0 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | SWIT_RS15450 | Not Available | Positive | 3355417 - 3355893 | 17778.4 |
| maleylacetoacetate isomerase | SWIT_RS15455 | Not Available | Positive | 3355913 - 3356533 | 22916.8 |
| gentisate 1,2-dioxygenase | SWIT_RS15460 | Not Available | Positive | 3356580 - 3357629 | 38716.6 |
| fumarylacetoacetate hydrolase family protein | SWIT_RS15465 | Not Available | Positive | 3357651 - 3358334 | 24135.8 |
| flavin-dependent oxidoreductase | SWIT_RS15470 | Not Available | Positive | 3358551 - 3359795 | 45633.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | SWIT_RS15475 | Not Available | Positive | 3359837 - 3361132 | 49308.6 |
| amidohydrolase family protein | SWIT_RS15480 | Not Available | Positive | 3361164 - 3362165 | 37119.2 |
| protocatechuate 3,4-dioxygenase | SWIT_RS15485 | Not Available | Positive | 3362184 - 3363206 | 37564.1 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
