Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | SWIT_RS15395 | Not Available | Negative | 3342080 - 3343882 | 64921.2 |
| voc family protein | SWIT_RS15400 | Not Available | Negative | 3343931 - 3344827 | 33107.2 |
| phytanoyl-coa dioxygenase family protein | SWIT_RS15405 | Not Available | Negative | 3344880 - 3345716 | 30934.4 |
| tonb-dependent receptor domain-containing protein | SWIT_RS15410 | Not Available | Negative | 3345738 - 3348032 | 82277.0 |
| hypothetical protein | SWIT_RS15415 | Not Available | Negative | 3348201 - 3348491 | 10959.3 |
| is1182 family transposase | SWIT_RS15420 | Not Available | Negative | 3348566 - 3349939 | 52134.2 |
| hypothetical protein | SWIT_RS28690 | Not Available | Negative | 3349972 - 3350112 | 5373.85 |
| is21-like element helper atpase istb | SWIT_RS15425 | Not Available | Negative | 3350303 - 3351031 | 26643.3 |
| is21 family transposase | SWIT_RS15430 | Not Available | Negative | 3351018 - 3352532 | 57504.9 |
| tetr/acrr family transcriptional regulator | SWIT_RS27300 | Not Available | Negative | 3352605 - 3353063 | 17020.4 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
