Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | SWIT_RS15345 | Not Available | Positive | 3327323 - 3327727 | 14357.2 |
| nad-dependent succinate-semialdehyde dehydrogenase | SWIT_RS15350 | Not Available | Positive | 3327724 - 3329190 | 51842.0 |
| dihydroxy-acid dehydratase | SWIT_RS15355 | Not Available | Positive | 3329225 - 3331081 | 65816.7 |
| l-serine ammonia-lyase | SWIT_RS15360 | Not Available | Negative | 3331094 - 3332473 | 47942.5 |
| duf3100 domain-containing protein | SWIT_RS15365 | Not Available | Negative | 3332487 - 3333746 | 43096.7 |
| s9 family peptidase | SWIT_RS15370 | Not Available | Positive | 3333954 - 3335990 | 74291.2 |
| amidohydrolase | SWIT_RS15375 | Not Available | Positive | 3335993 - 3337201 | 43198.4 |
| marr family transcriptional regulator | SWIT_RS15380 | Not Available | Negative | 3337416 - 3337907 | 18367.3 |
| arylsulfatase | SWIT_RS15385 | Not Available | Negative | 3337971 - 3339653 | 60354.7 |
| tonb-dependent receptor | SWIT_RS15390 | Not Available | Negative | 3339647 - 3341974 | 83541.7 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
