Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS01465 | Not Available | Positive | 309464 - 310231 | 26212.0 |
| gfo/idh/moca family protein | SWIT_RS01470 | Not Available | Negative | 310386 - 311540 | 42016.0 |
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS01475 | Not Available | Positive | 311704 - 312666 | 33373.5 |
| acyl-coa thioesterase | SWIT_RS01480 | Not Available | Positive | 312659 - 313564 | 32738.9 |
| taud/tfda dioxygenase family protein | SWIT_RS01485 | Not Available | Positive | 313585 - 314433 | 30793.5 |
| mfs transporter | SWIT_RS01490 | Not Available | Negative | 314443 - 315702 | 44017.4 |
| enoyl-coa hydratase/isomerase family protein | SWIT_RS01495 | Not Available | Positive | 315865 - 316662 | 28085.0 |
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS01500 | Not Available | Positive | 316680 - 317468 | 26048.0 |
| tetr family transcriptional regulator | SWIT_RS01505 | Not Available | Negative | 317507 - 318118 | 23199.2 |
| tonb-dependent receptor | SWIT_RS01510 | Not Available | Positive | 318516 - 320837 | 84439.0 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
