Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | SWIT_RS15005 | Not Available | Negative | 3251219 - 3251932 | 23902.6 |
| tetr/acrr family transcriptional regulator | SWIT_RS15010 | Not Available | Positive | 3252005 - 3252601 | 20417.2 |
| calcium-binding ef-hand-containing protein | SWIT_RS15015 | Not Available | Negative | 3252718 - 3253347 | 22496.5 |
| hypothetical protein | SWIT_RS15020 | Not Available | Negative | 3253561 - 3254040 | 17146.3 |
| argininosuccinate synthase | SWIT_RS15025 | Not Available | Positive | 3254157 - 3255374 | 45238.9 |
| hypothetical protein | SWIT_RS15030 | Not Available | Negative | 3255465 - 3257099 | 59007.9 |
| is110 family transposase | SWIT_RS15035 | Not Available | Negative | 3257169 - 3258125 | 34906.6 |
| sensor histidine kinase | SWIT_RS15040 | Not Available | Positive | 3258514 - 3259623 | 41099.8 |
| lytr/algr family response regulator transcription factor | SWIT_RS15045 | Not Available | Positive | 3259620 - 3260420 | 30310.5 |
| hpch/hpai aldolase/citrate lyase family protein | SWIT_RS15050 | Not Available | Positive | 3260437 - 3261414 | 34066.7 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
