Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase ib | SWIT_RS14905 | Not Available | Positive | 3229399 - 3230358 | 34755.7 |
| response regulator | SWIT_RS14910 | Not Available | Negative | 3230374 - 3230745 | 13023.8 |
| j domain-containing protein | SWIT_RS14915 | Not Available | Negative | 3230861 - 3231391 | 20170.0 |
| amp-dependent synthetase/ligase | SWIT_RS14920 | Not Available | Positive | 3231553 - 3233328 | 64552.1 |
| tonb-dependent receptor | SWIT_RS14925 | Not Available | Positive | 3233818 - 3236370 | 91256.2 |
| acyltransferase family protein | SWIT_RS14930 | Not Available | Positive | 3236614 - 3237615 | 36961.7 |
| s9 family peptidase | SWIT_RS14935 | Not Available | Negative | 3237638 - 3239725 | 74044.2 |
| atp-binding protein | SWIT_RS14940 | Not Available | Negative | 3239810 - 3241165 | 47442.5 |
| response regulator transcription factor | SWIT_RS14945 | Not Available | Negative | 3241162 - 3241842 | 24701.1 |
| hypothetical protein | SWIT_RS14950 | Not Available | Positive | 3242089 - 3242727 | 23286.6 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
