Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufb | SWIT_RS14765 | Not Available | Negative | 3204023 - 3205495 | 54164.0 |
| suf system fe-s cluster assembly regulator | SWIT_RS14770 | Not Available | Negative | 3205499 - 3205903 | 13731.6 |
| quinone-dependent dihydroorotate dehydrogenase | SWIT_RS14775 | Not Available | Positive | 3206158 - 3207192 | 35902.3 |
| lysr family transcriptional regulator | SWIT_RS14780 | Not Available | Negative | 3207202 - 3208053 | 30456.7 |
| amidohydrolase family protein | SWIT_RS14785 | Not Available | Positive | 3208159 - 3209610 | 51806.9 |
| nucleoside deaminase | SWIT_RS14790 | Not Available | Positive | 3209607 - 3210098 | 17102.3 |
| cyanate transporter | SWIT_RS14795 | Not Available | Positive | 3210064 - 3211326 | 42785.5 |
| eal domain-containing protein | SWIT_RS14800 | Not Available | Negative | 3211242 - 3212855 | 58494.2 |
| isocitrate lyase | SWIT_RS14805 | Not Available | Negative | 3212981 - 3214576 | 59063.9 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | SWIT_RS14810 | Not Available | Positive | 3214831 - 3216474 | 58707.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
