Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | SWIT_RS14620 | Not Available | Negative | 3174135 - 3176117 | 71590.9 |
| biotin synthase biob | SWIT_RS14625 | Not Available | Negative | 3176239 - 3177255 | 36394.6 |
| methylmalonyl-coa mutase | SWIT_RS14630 | Not Available | Negative | 3177252 - 3179402 | 77069.2 |
| methylmalonyl-coa epimerase | SWIT_RS14635 | Not Available | Negative | 3179434 - 3179859 | 15323.5 |
| acetyl-coa c-acyltransferase family protein | SWIT_RS14640 | Not Available | Negative | 3179856 - 3181037 | 40812.6 |
| acyl-coa carboxylase subunit beta | SWIT_RS14645 | Not Available | Negative | 3181199 - 3182731 | 55698.9 |
| short-chain fatty acyl-coa regulator family protein | SWIT_RS14650 | Not Available | Positive | 3182881 - 3184302 | 52683.1 |
| hypothetical protein | SWIT_RS14655 | Not Available | Positive | 3184349 - 3184813 | 16675.2 |
| duf952 domain-containing protein | SWIT_RS14660 | Not Available | Negative | 3184919 - 3185266 | 12173.4 |
| 3-hydroxyacyl-coa dehydrogenase family protein | SWIT_RS14665 | Not Available | Negative | 3185284 - 3186153 | 30376.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
