Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | SWIT_RS14475 | Not Available | Positive | 3141769 - 3142770 | 36064.9 |
| utp--glucose-1-phosphate uridylyltransferase galu | SWIT_RS14480 | Not Available | Negative | 3142877 - 3143746 | 31296.8 |
| diaminopimelate decarboxylase | SWIT_RS14485 | Not Available | Negative | 3143813 - 3145084 | 44194.2 |
| hypothetical protein | SWIT_RS14490 | Not Available | Negative | 3145218 - 3145463 | 8628.34 |
| argininosuccinate lyase | SWIT_RS14495 | Not Available | Negative | 3145460 - 3146836 | 49468.1 |
| tlpa disulfide reductase family protein | SWIT_RS14500 | Not Available | Positive | 3146934 - 3147395 | 16853.3 |
| voc family protein | SWIT_RS14505 | Not Available | Negative | 3147504 - 3147887 | 13497.0 |
| doda-type extradiol aromatic ring-opening family dioxygenase | SWIT_RS14510 | Not Available | Positive | 3148034 - 3148819 | 28458.7 |
| ai-2e family transporter | SWIT_RS14515 | Not Available | Positive | 3148925 - 3150001 | 38734.6 |
| deda family protein | SWIT_RS14520 | Not Available | Negative | 3150026 - 3150637 | 22605.1 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
