Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication/repair protein recf | SWIT_RS14175 | Not Available | Positive | 3087704 - 3088774 | 37689.3 |
| fluoride efflux transporter crcb | SWIT_RS14180 | Not Available | Negative | 3088803 - 3089180 | 13081.6 |
| dna topoisomerase (atp-hydrolyzing) subunit b | SWIT_RS14185 | Not Available | Positive | 3089384 - 3091864 | 90777.0 |
| duf3999 domain-containing protein | SWIT_RS14190 | Not Available | Negative | 3091939 - 3093288 | 46644.2 |
| duf2339 domain-containing protein | SWIT_RS14195 | Not Available | Negative | 3093285 - 3096110 | 98169.6 |
| rdd family protein | SWIT_RS14200 | Not Available | Negative | 3096193 - 3097035 | 30751.4 |
| yaii/yqxd family protein | SWIT_RS14205 | Not Available | Positive | 3097283 - 3097774 | 17070.7 |
| srpbcc family protein | SWIT_RS14210 | Not Available | Negative | 3097749 - 3098279 | 17878.7 |
| duf1993 family protein | SWIT_RS14215 | Not Available | Negative | 3098276 - 3098809 | 19137.8 |
| hypothetical protein | SWIT_RS14220 | Not Available | Negative | 3098954 - 3099277 | 11493.0 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
