Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | SWIT_RS13975 | Not Available | Negative | 3049057 - 3051318 | 80605.3 |
| dna mismatch repair protein muts | SWIT_RS13980 | Not Available | Positive | 3051434 - 3054061 | 92711.2 |
| hypothetical protein | SWIT_RS13985 | Not Available | Positive | 3054173 - 3054778 | 20676.5 |
| paai family thioesterase | SWIT_RS13990 | Not Available | Negative | 3054789 - 3055220 | 15440.9 |
| plp-dependent aminotransferase family protein | SWIT_RS13995 | Not Available | Negative | 3055230 - 3056591 | 47374.3 |
| duf983 domain-containing protein | SWIT_RS14000 | Not Available | Positive | 3056673 - 3057116 | 16182.9 |
| fad-binding oxidoreductase | SWIT_RS14005 | Not Available | Positive | 3057176 - 3058615 | 54352.7 |
| is1182 family transposase | SWIT_RS14010 | Not Available | Positive | 3058672 - 3060045 | 52134.2 |
| fad-binding oxidoreductase | SWIT_RS14015 | Not Available | Positive | 3060120 - 3061469 | 49738.8 |
| hypothetical protein | SWIT_RS14020 | Not Available | Negative | 3061486 - 3062013 | 18515.6 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
