Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | SWIT_RS13875 | Not Available | Negative | 3026863 - 3027534 | 25027.5 |
| abc transporter permease | SWIT_RS13880 | Not Available | Positive | 3027641 - 3028738 | 39547.0 |
| abc transporter atp-binding protein | SWIT_RS13885 | Not Available | Positive | 3028738 - 3029556 | 29297.3 |
| mlad family protein | SWIT_RS13890 | Not Available | Positive | 3029564 - 3030511 | 33016.7 |
| abc-type transport auxiliary lipoprotein family protein | SWIT_RS13895 | Not Available | Positive | 3030516 - 3031103 | 20391.4 |
| threonine--trna ligase | SWIT_RS13900 | Not Available | Positive | 3031304 - 3033310 | 75048.2 |
| translation initiation factor if-3 | SWIT_RS13905 | Not Available | Positive | 3033437 - 3033976 | 20625.2 |
| pr6pr family membrane protein | SWIT_RS13910 | Not Available | Negative | 3034117 - 3034758 | 22802.2 |
| voc family protein | SWIT_RS13915 | Not Available | Negative | 3034755 - 3035144 | 13858.3 |
| hypothetical protein | SWIT_RS13920 | Not Available | Negative | 3035338 - 3035589 | 8888.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
