Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase acna | SWIT_RS13825 | Not Available | Positive | 3013912 - 3016596 | 96010.1 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | SWIT_RS13830 | Not Available | Negative | 3016743 - 3019508 | 98836.7 |
| hypothetical protein | SWIT_RS13835 | Not Available | Negative | 3019689 - 3020714 | 36411.4 |
| lyttr family dna-binding domain-containing protein | SWIT_RS13840 | Not Available | Positive | 3020943 - 3021761 | 30092.1 |
| mfs transporter | SWIT_RS13845 | Not Available | Positive | 3021829 - 3023160 | 47884.1 |
| ygfz/gcvt domain-containing protein | SWIT_RS13850 | Not Available | Negative | 3023171 - 3023839 | 24106.9 |
| dihydroorotase | SWIT_RS13855 | Not Available | Positive | 3023880 - 3025205 | 47762.0 |
| chap domain-containing protein | SWIT_RS13860 | Not Available | Positive | 3025659 - 3026117 | 16197.4 |
| type ii toxin-antitoxin system rele/pare family toxin | SWIT_RS13865 | Not Available | Negative | 3026185 - 3026541 | 13010.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | SWIT_RS13870 | Not Available | Negative | 3026545 - 3026808 | 9529.58 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
