Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii aldolase/adducin family protein | SWIT_RS13675 | Not Available | Positive | 2987790 - 2988524 | 27517.6 |
| tetr family transcriptional regulator | SWIT_RS13680 | Not Available | Positive | 2988636 - 2989190 | 19570.6 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | SWIT_RS13685 | Not Available | Negative | 2989165 - 2989686 | 17993.7 |
| pseudouridine synthase | SWIT_RS13690 | Not Available | Negative | 2989683 - 2990543 | 31450.3 |
| crp/fnr family transcriptional regulator | SWIT_RS13695 | Not Available | Negative | 2990700 - 2991386 | 25048.1 |
| hypothetical protein | SWIT_RS13700 | Not Available | Negative | 2991523 - 2991744 | 7804.09 |
| hypothetical protein | SWIT_RS13705 | Not Available | Positive | 2991841 - 2992377 | 17845.2 |
| fluoride efflux transporter crcb | SWIT_RS13710 | Not Available | Positive | 2992431 - 2992808 | 12893.3 |
| rlua family pseudouridine synthase | SWIT_RS13715 | Not Available | Positive | 2992805 - 2993911 | 40477.1 |
| had hydrolase-like protein | SWIT_RS13720 | Not Available | Positive | 2993908 - 2994600 | 24379.1 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
