Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | SWIT_RS13480 | Not Available | Positive | 2940771 - 2941145 | 13382.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | SWIT_RS13485 | Not Available | Positive | 2941156 - 2941896 | 26854.0 |
| 50s ribosomal protein l19 | SWIT_RS13490 | Not Available | Positive | 2941899 - 2942288 | 14499.5 |
| aspartate-semialdehyde dehydrogenase | SWIT_RS13495 | Not Available | Positive | 2942397 - 2943422 | 37309.9 |
| gfa family protein | SWIT_RS13500 | Not Available | Positive | 2943527 - 2943970 | 16490.5 |
| alpha/beta fold hydrolase | SWIT_RS13505 | Not Available | Positive | 2943951 - 2944724 | 27117.6 |
| m2 family metallopeptidase | SWIT_RS13510 | Not Available | Positive | 2944830 - 2946692 | 68406.4 |
| sensor domain-containing diguanylate cyclase | SWIT_RS13515 | Not Available | Positive | 2946988 - 2948160 | 41573.1 |
| amp nucleosidase | SWIT_RS13520 | Not Available | Negative | 2948308 - 2949756 | 53500.8 |
| peroxiredoxin | SWIT_RS13525 | Not Available | Negative | 2949802 - 2950284 | 16794.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
