Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative toxin-antitoxin system toxin component, pin family | SWIT_RS13365 | Not Available | Positive | 2915505 - 2915930 | 15403.7 |
| hypothetical protein | SWIT_RS13370 | Not Available | Positive | 2915927 - 2916181 | 8764.47 |
| lysr family transcriptional regulator | SWIT_RS13375 | Not Available | Negative | 2916200 - 2917117 | 34452.0 |
| rieske 2fe-2s domain-containing protein | SWIT_RS13380 | Not Available | Positive | 2917282 - 2918634 | 50188.9 |
| benzoate 1,2-dioxygenase small subunit | SWIT_RS13385 | Not Available | Positive | 2918631 - 2919146 | 20045.6 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | SWIT_RS13390 | Not Available | Positive | 2919160 - 2919942 | 26578.9 |
| hypothetical protein | SWIT_RS13395 | Not Available | Negative | 2920025 - 2920468 | 15754.0 |
| aaa family atpase | SWIT_RS13400 | Not Available | Negative | 2920531 - 2921376 | 31896.7 |
| duf6975 family protein | SWIT_RS13405 | Not Available | Negative | 2921448 - 2922125 | 23304.1 |
| sugar transferase | SWIT_RS13410 | Not Available | Positive | 2922321 - 2922989 | 25046.6 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
