Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain-containing protein | SWIT_RS13315 | Not Available | Negative | 2903241 - 2905856 | 91852.8 |
| amino acid abc transporter atp-binding protein | SWIT_RS13320 | Not Available | Negative | 2906050 - 2906775 | 26807.7 |
| amino acid abc transporter permease | SWIT_RS13325 | Not Available | Negative | 2906772 - 2907860 | 38952.7 |
| abc transporter permease subunit | SWIT_RS13330 | Not Available | Negative | 2907857 - 2908981 | 39990.9 |
| amino acid abc transporter substrate-binding protein | SWIT_RS13335 | Not Available | Negative | 2908981 - 2910024 | 37775.2 |
| trans-sulfuration enzyme family protein | SWIT_RS13340 | Not Available | Negative | 2910027 - 2911322 | 46126.8 |
| carbon starvation csta family protein | SWIT_RS13345 | Not Available | Positive | 2911437 - 2913485 | 72300.2 |
| ybdd/yjix family protein | SWIT_RS13350 | Not Available | Positive | 2913482 - 2913667 | 7059.44 |
| dicarboxylate/amino acid:cation symporter | SWIT_RS13355 | Not Available | Positive | 2913679 - 2914932 | 43412.2 |
| rida family protein | SWIT_RS13360 | Not Available | Positive | 2914932 - 2915447 | 17758.6 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
