Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | SWIT_RS13265 | Not Available | Negative | 2894636 - 2895961 | 47518.4 |
| hypothetical protein | SWIT_RS13270 | Not Available | Negative | 2896079 - 2896615 | 18619.3 |
| rna polymerase sigma factor | SWIT_RS13275 | Not Available | Negative | 2896720 - 2897298 | 21385.8 |
| periplasmic heavy metal sensor | SWIT_RS13280 | Not Available | Negative | 2897295 - 2897729 | 15911.4 |
| hypothetical protein | SWIT_RS13285 | Not Available | Negative | 2897731 - 2898012 | 9277.35 |
| copper homeostasis periplasmic binding protein copc | SWIT_RS13290 | Not Available | Positive | 2898131 - 2898523 | 13262.3 |
| copper homeostasis membrane protein copd | SWIT_RS13295 | Not Available | Positive | 2898526 - 2899398 | 30172.7 |
| nad(p)/fad-dependent oxidoreductase | SWIT_RS13300 | Not Available | Positive | 2899488 - 2900699 | 43559.1 |
| lysr substrate-binding domain-containing protein | SWIT_RS13305 | Not Available | Positive | 2900786 - 2901679 | 32174.7 |
| amidase | SWIT_RS13310 | Not Available | Negative | 2901685 - 2903226 | 52630.3 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
