Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | SWIT_RS13215 | Not Available | Positive | 2882412 - 2884379 | 69910.2 |
| type i glyceraldehyde-3-phosphate dehydrogenase | SWIT_RS13220 | Not Available | Positive | 2884395 - 2885402 | 35636.6 |
| mosc domain-containing protein | SWIT_RS13225 | Not Available | Positive | 2885520 - 2885975 | 16329.8 |
| phosphoglycerate kinase | SWIT_RS13230 | Not Available | Positive | 2885978 - 2887171 | 41397.6 |
| voc family protein | SWIT_RS13235 | Not Available | Positive | 2887173 - 2887607 | 15468.5 |
| fructose bisphosphate aldolase | SWIT_RS13240 | Not Available | Positive | 2887621 - 2888517 | 32083.9 |
| efflux rnd transporter permease subunit | SWIT_RS13245 | Not Available | Negative | 2888560 - 2891745 | 112983.0 |
| efflux rnd transporter periplasmic adaptor subunit | SWIT_RS13250 | Not Available | Negative | 2891750 - 2892913 | 39555.4 |
| tolc family protein | SWIT_RS13255 | Not Available | Negative | 2892910 - 2894187 | 43592.9 |
| hypothetical protein | SWIT_RS13260 | Not Available | Negative | 2894245 - 2894574 | 11513.5 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
