Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein n | SWIT_RS28190 | Not Available | Positive | 2865533 - 2866288 | 25614.2 |
| type ii secretion system f family protein | SWIT_RS13120 | Not Available | Negative | 2866447 - 2867667 | 42941.3 |
| type ii secretion system atpase gspe | SWIT_RS13125 | Not Available | Negative | 2867667 - 2869127 | 52746.5 |
| type ii secretion system protein m | SWIT_RS13130 | Not Available | Negative | 2869124 - 2869630 | 18227.3 |
| type ii secretion system protein gspl | SWIT_RS13135 | Not Available | Negative | 2869749 - 2870780 | 34812.0 |
| type ii secretion system major pseudopilin gspg | SWIT_RS13140 | Not Available | Positive | 2870860 - 2871345 | 17126.3 |
| gsph/fimt family pseudopilin | SWIT_RS13145 | Not Available | Positive | 2871345 - 2871806 | 15923.2 |
| type ii secretion system minor pseudopilin gspi | SWIT_RS13150 | Not Available | Positive | 2871803 - 2872204 | 13672.4 |
| type ii secretion system protein n | SWIT_RS13155 | Not Available | Positive | 2872201 - 2873022 | 26869.3 |
| type ii secretion system secretin gspd | SWIT_RS13160 | Not Available | Positive | 2873034 - 2875082 | 70731.5 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
