Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | SWIT_RS13065 | Not Available | Positive | 2851675 - 2852184 | 18837.1 |
| prolyl hydroxylase family protein | SWIT_RS13070 | Not Available | Positive | 2852278 - 2852916 | 23765.2 |
| hypothetical protein | SWIT_RS13075 | Not Available | Positive | 2853042 - 2854565 | 51543.7 |
| tonb-dependent receptor domain-containing protein | SWIT_RS13080 | Not Available | Positive | 2854644 - 2857337 | 97794.3 |
| glycoside hydrolase family 130 protein | SWIT_RS13085 | Not Available | Negative | 2857405 - 2858691 | 47236.4 |
| glycosyltransferase family 4 protein | SWIT_RS13090 | Not Available | Negative | 2858744 - 2861047 | 81589.9 |
| m28 family metallopeptidase | SWIT_RS13095 | Not Available | Negative | 2861166 - 2862821 | 58064.2 |
| type ii secretion system protein gspk | SWIT_RS13100 | Not Available | Negative | 2862884 - 2863738 | 29217.4 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SWIT_RS13105 | Not Available | Negative | 2863888 - 2864463 | 20448.8 |
| penicillin-binding protein activator | SWIT_RS13110 | Not Available | Negative | 2864532 - 2865527 | 33231.9 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
