Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | SWIT_RS12920 | Not Available | Positive | 2830871 - 2831260 | 14081.8 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | SWIT_RS12925 | Not Available | Positive | 2831296 - 2831718 | 15784.1 |
| peptidoglycan dd-metalloendopeptidase family protein | SWIT_RS12930 | Not Available | Positive | 2831796 - 2832959 | 40908.5 |
| s41 family peptidase | SWIT_RS12935 | Not Available | Positive | 2833143 - 2834444 | 47068.2 |
| disulfide bond formation protein b | SWIT_RS12940 | Not Available | Positive | 2834630 - 2835103 | 16672.7 |
| demethoxyubiquinone hydroxylase family protein | SWIT_RS12945 | Not Available | Positive | 2835100 - 2835657 | 19711.4 |
| hypothetical protein | SWIT_RS12950 | Not Available | Positive | 2835687 - 2836085 | 14224.8 |
| hypothetical protein | SWIT_RS12955 | Not Available | Positive | 2836169 - 2836552 | 14009.0 |
| leucyl/phenylalanyl-trna--protein transferase | SWIT_RS12960 | Not Available | Positive | 2836625 - 2837371 | 26352.4 |
| fad-binding oxidoreductase | SWIT_RS27965 | Not Available | Negative | 2837347 - 2837640 | 11016.1 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
