Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SWIT_RS12725 | Not Available | Positive | 2788653 - 2789489 | 29479.1 |
| ggdef domain-containing protein | SWIT_RS12730 | Not Available | Negative | 2789506 - 2790630 | 39574.5 |
| pyridoxal phosphate-dependent aminotransferase | SWIT_RS12735 | Not Available | Positive | 2790759 - 2791883 | 40874.4 |
| tetr/acrr family transcriptional regulator | SWIT_RS12740 | Not Available | Negative | 2791995 - 2792861 | 32007.5 |
| arylsulfatase | SWIT_RS12745 | Not Available | Positive | 2792968 - 2795328 | 85768.9 |
| tonb-dependent receptor | SWIT_RS12750 | Not Available | Positive | 2795369 - 2797798 | 87517.1 |
| arylsulfatase | SWIT_RS12755 | Not Available | Positive | 2797860 - 2800157 | 82454.3 |
| srpbcc family protein | SWIT_RS12760 | Not Available | Negative | 2800158 - 2800595 | 16366.5 |
| nuclear transport factor 2 family protein | SWIT_RS12765 | Not Available | Negative | 2800595 - 2800951 | 12829.8 |
| rieske 2fe-2s domain-containing protein | SWIT_RS12770 | Not Available | Negative | 2800962 - 2801993 | 38431.4 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
