Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating oxygenase subunit alpha | SWIT_RS12675 | Not Available | Negative | 2777787 - 2778785 | 36695.5 |
| lrp/asnc family transcriptional regulator | SWIT_RS12680 | Not Available | Positive | 2778967 - 2779488 | 19169.9 |
| srpbcc family protein | SWIT_RS12685 | Not Available | Positive | 2779519 - 2779962 | 15897.2 |
| hydroxyacylglutathione hydrolase | SWIT_RS12690 | Not Available | Positive | 2779962 - 2780732 | 27962.2 |
| fad/nad(p)-binding protein | SWIT_RS12695 | Not Available | Negative | 2780756 - 2782144 | 49666.7 |
| tonb-dependent receptor plug domain-containing protein | SWIT_RS12700 | Not Available | Negative | 2782148 - 2784676 | 89181.0 |
| abc transporter substrate-binding protein | SWIT_RS12705 | Not Available | Negative | 2784779 - 2785735 | 33229.9 |
| llm class flavin-dependent oxidoreductase | SWIT_RS12710 | Not Available | Negative | 2785732 - 2786826 | 39826.8 |
| abc transporter atp-binding protein | SWIT_RS12715 | Not Available | Negative | 2786878 - 2787663 | 28293.3 |
| abc transporter permease | SWIT_RS12720 | Not Available | Negative | 2787667 - 2788467 | 28484.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
