Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate--coa ligase | SWIT_RS12625 | Not Available | Negative | 2766258 - 2767772 | 53762.4 |
| lipopolysaccharide biosynthesis protein | SWIT_RS12630 | Not Available | Negative | 2767813 - 2769123 | 44250.8 |
| glycosyltransferase | SWIT_RS12635 | Not Available | Negative | 2769120 - 2770244 | 40097.8 |
| sugar-transfer associated atp-grasp domain-containing protein | SWIT_RS12640 | Not Available | Positive | 2770318 - 2771463 | 41005.0 |
| phosphoribosylglycinamide synthetase | SWIT_RS12645 | Not Available | Positive | 2771563 - 2772597 | 38200.2 |
| ntp transferase domain-containing protein | SWIT_RS12650 | Not Available | Positive | 2772584 - 2773426 | 29412.0 |
| nad(p)/fad-dependent oxidoreductase | SWIT_RS27280 | Not Available | Negative | 2773423 - 2774694 | 43534.7 |
| rida family protein | SWIT_RS12660 | Not Available | Negative | 2774691 - 2775074 | 13517.1 |
| tonb-dependent receptor | SWIT_RS12665 | Not Available | Negative | 2775074 - 2777275 | 79828.2 |
| hypothetical protein | SWIT_RS12670 | Not Available | Negative | 2777323 - 2777760 | 15504.5 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
