Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | SWIT_RS12435 | Not Available | Negative | 2725645 - 2726175 | 19329.0 |
| 30s ribosomal protein s1 | SWIT_RS12440 | Not Available | Negative | 2726296 - 2728005 | 61655.4 |
| (d)cmp kinase | SWIT_RS12445 | Not Available | Negative | 2728289 - 2728915 | 21442.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SWIT_RS12450 | Not Available | Negative | 2728912 - 2730258 | 46115.9 |
| tigr02300 family protein | SWIT_RS12455 | Not Available | Positive | 2730375 - 2730695 | 11700.0 |
| Trna-ala | Not Available | Not Available | Positive | 2730852 - 2730927 | Not Available |
| site-specific integrase | SWIT_RS12465 | Not Available | Positive | 2731018 - 2732808 | 68594.4 |
| hypothetical protein | SWIT_RS12470 | Not Available | Negative | 2732811 - 2733278 | 17519.9 |
| type ii restriction endonuclease | SWIT_RS12475 | Not Available | Negative | 2733431 - 2734189 | 28287.8 |
| dna cytosine methyltransferase | SWIT_RS27505 | Not Available | Positive | 2734254 - 2735486 | 45367.4 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
