Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | SWIT_RS12385 | Not Available | Positive | 2715158 - 2716429 | 46378.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | SWIT_RS12390 | Not Available | Positive | 2716441 - 2716863 | 15043.1 |
| alkene reductase | SWIT_RS12395 | Not Available | Negative | 2716971 - 2718026 | 37270.1 |
| dmt family transporter | SWIT_RS12400 | Not Available | Positive | 2718137 - 2719018 | 30655.7 |
| coq9 family protein | SWIT_RS12405 | Not Available | Positive | 2719015 - 2719677 | 24300.5 |
| ferrous iron transport protein a | SWIT_RS12410 | Not Available | Positive | 2719734 - 2720000 | 9400.47 |
| ferrous iron transporter b | SWIT_RS12415 | Not Available | Positive | 2720014 - 2721879 | 66780.8 |
| single-stranded dna-binding protein | SWIT_RS12420 | Not Available | Positive | 2722006 - 2722593 | 20002.9 |
| capsule polysaccharide biosynthesis protein | SWIT_RS12425 | Not Available | Positive | 2722734 - 2724275 | 55448.5 |
| capsule biosynthesis protein | SWIT_RS12430 | Not Available | Positive | 2724272 - 2725534 | 46875.9 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
