Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis/export family protein | SWIT_RS12190 | Not Available | Negative | 2677566 - 2678201 | 21913.6 |
| integration host factor subunit beta | SWIT_RS27500 | Not Available | Negative | 2678792 - 2679070 | 10311.5 |
| is5 family transposase | SWIT_RS12200 | Not Available | Positive | 2679235 - 2680047 | 30680.9 |
| c-type cytochrome | SWIT_RS12205 | Not Available | Positive | 2680240 - 2680605 | 12567.5 |
| hypothetical protein | SWIT_RS12210 | Not Available | Negative | 2680610 - 2681611 | 37060.8 |
| lrp/asnc family transcriptional regulator | SWIT_RS12215 | Not Available | Negative | 2681701 - 2682180 | 18384.5 |
| s10 family peptidase | SWIT_RS12220 | Not Available | Positive | 2682418 - 2683902 | 53387.3 |
| ornithine cyclodeaminase family protein | SWIT_RS12225 | Not Available | Positive | 2683920 - 2684888 | 33595.1 |
| amidohydrolase family protein | SWIT_RS12230 | Not Available | Positive | 2684885 - 2686993 | 75871.8 |
| s10 family peptidase | SWIT_RS12235 | Not Available | Positive | 2686983 - 2688476 | 52342.8 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
