Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase cysq | SWIT_RS11940 | Not Available | Negative | 2623335 - 2624114 | 27399.6 |
| tldd/pmba family protein | SWIT_RS11945 | Not Available | Negative | 2624107 - 2625453 | 46304.7 |
| 4-hydroxybenzoate octaprenyltransferase | SWIT_RS11950 | Not Available | Negative | 2625650 - 2626609 | 34528.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | SWIT_RS11955 | Not Available | Positive | 2626608 - 2627369 | 27474.5 |
| glutamate--cysteine ligase | SWIT_RS11960 | Not Available | Positive | 2627411 - 2628781 | 51120.0 |
| cap domain-containing protein | SWIT_RS11965 | Not Available | Positive | 2629240 - 2629782 | 19691.2 |
| pep-cterm sorting domain-containing protein | SWIT_RS11970 | Not Available | Negative | 2629904 - 2630401 | 17181.0 |
| exosortase v | SWIT_RS11975 | Not Available | Positive | 2630626 - 2631558 | 33990.5 |
| exosortase-associated protein epsi, v-type | SWIT_RS11980 | Not Available | Positive | 2631555 - 2632301 | 27651.4 |
| xrtv sorting system accessory protein | SWIT_RS11985 | Not Available | Negative | 2632310 - 2632579 | 9458.62 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
