Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating dioxygenase subunit alpha | SWIT_RS11690 | Not Available | Positive | 2569758 - 2570846 | 39564.6 |
| voc family protein | SWIT_RS11695 | Not Available | Positive | 2570827 - 2571831 | 37398.4 |
| acyl-coa dehydrogenase family protein | SWIT_RS29040 | Not Available | Positive | 2572819 - 2573322 | 17919.8 |
| amidohydrolase family protein | SWIT_RS11705 | Not Available | Negative | 2573379 - 2574440 | 37828.4 |
| sdr family oxidoreductase | SWIT_RS11710 | Not Available | Positive | 2574632 - 2575501 | 31306.8 |
| 3-isopropylmalate dehydratase small subunit | SWIT_RS11715 | Not Available | Negative | 2575518 - 2576135 | 22270.8 |
| 3-isopropylmalate dehydratase large subunit | SWIT_RS11720 | Not Available | Negative | 2576139 - 2577581 | 50349.3 |
| hydroxymethylglutaryl-coa lyase | SWIT_RS11725 | Not Available | Negative | 2577578 - 2578501 | 31874.3 |
| coa transferase | SWIT_RS11730 | Not Available | Negative | 2578498 - 2579724 | 42971.7 |
| lysr family transcriptional regulator | SWIT_RS11735 | Not Available | Negative | 2579799 - 2580755 | 34031.1 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
