Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SWIT_RS11640 | Not Available | Negative | 2556819 - 2559011 | 78443.6 |
| tonb-dependent receptor | SWIT_RS11645 | Not Available | Negative | 2559528 - 2561720 | 79501.5 |
| fumarylacetoacetate hydrolase family protein | SWIT_RS11650 | Not Available | Negative | 2561893 - 2562924 | 37231.1 |
| smp-30/gluconolactonase/lre family protein | SWIT_RS11655 | Not Available | Negative | 2562962 - 2563999 | 37465.5 |
| 3-keto-5-aminohexanoate cleavage protein | SWIT_RS11660 | Not Available | Negative | 2563996 - 2564925 | 33902.7 |
| lysr family transcriptional regulator | SWIT_RS11665 | Not Available | Negative | 2565101 - 2566051 | 34840.2 |
| sdr family oxidoreductase | SWIT_RS11670 | Not Available | Positive | 2566239 - 2567027 | 26832.3 |
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS11675 | Not Available | Positive | 2567053 - 2567937 | 30279.3 |
| amidohydrolase family protein | SWIT_RS11680 | Not Available | Negative | 2568082 - 2569146 | 38143.7 |
| nuclear transport factor 2 family protein | SWIT_RS11685 | Not Available | Negative | 2569158 - 2569550 | 14474.2 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
