Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | SWIT_RS11540 | Not Available | Negative | 2536140 - 2536691 | 20290.0 |
| winged helix-turn-helix transcriptional regulator | SWIT_RS11545 | Not Available | Negative | 2536776 - 2537150 | 13750.7 |
| nad(p)h-dependent oxidoreductase | SWIT_RS11550 | Not Available | Positive | 2537241 - 2537822 | 20096.1 |
| llm class flavin-dependent oxidoreductase | SWIT_RS11555 | Not Available | Negative | 2537859 - 2539181 | 47822.9 |
| voc family protein | SWIT_RS11560 | Not Available | Negative | 2539196 - 2539795 | 22539.5 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | SWIT_RS11565 | Not Available | Negative | 2539835 - 2540938 | 41578.1 |
| fumarylacetoacetate hydrolase family protein | SWIT_RS11570 | Not Available | Positive | 2541080 - 2541979 | 32341.0 |
| mfs transporter | SWIT_RS11575 | Not Available | Negative | 2541970 - 2543154 | 39250.3 |
| rida family protein | SWIT_RS11580 | Not Available | Negative | 2543151 - 2544554 | 49793.4 |
| mbl fold metallo-hydrolase | SWIT_RS11585 | Not Available | Negative | 2544614 - 2545576 | 35680.8 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
