Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | SWIT_RS11490 | Not Available | Negative | 2526226 - 2527200 | 34743.1 |
| aromatic ring-hydroxylating oxygenase subunit alpha | SWIT_RS11495 | Not Available | Negative | 2527211 - 2528542 | 50902.1 |
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS11500 | Not Available | Negative | 2528556 - 2529317 | 26688.1 |
| tetr/acrr family transcriptional regulator | SWIT_RS11505 | Not Available | Positive | 2529552 - 2530262 | 26074.5 |
| thua domain-containing protein | SWIT_RS11510 | Not Available | Negative | 2530250 - 2530981 | 26969.2 |
| caib/baif coa transferase family protein | SWIT_RS11515 | Not Available | Positive | 2531053 - 2532258 | 43391.9 |
| zn-ribbon domain-containing ob-fold protein | SWIT_RS11520 | Not Available | Positive | 2532255 - 2532626 | 13269.9 |
| thiolase | SWIT_RS11525 | Not Available | Positive | 2532629 - 2533780 | 39119.6 |
| ompa family protein | SWIT_RS11530 | Not Available | Negative | 2534029 - 2535150 | 39444.6 |
| enoyl-coa hydratase/isomerase family protein | SWIT_RS11535 | Not Available | Negative | 2535377 - 2536147 | 26756.1 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
