Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein b | SWIT_RS11240 | Not Available | Negative | 2473958 - 2474983 | 37162.5 |
| copper resistance system multicopper oxidase | SWIT_RS11245 | Not Available | Negative | 2474980 - 2476671 | 61943.5 |
| hypothetical protein | SWIT_RS11250 | Not Available | Negative | 2476747 - 2476992 | 8145.54 |
| hypothetical protein | SWIT_RS11255 | Not Available | Negative | 2477016 - 2477351 | 11334.1 |
| metal-dependent hydrolase family protein | SWIT_RS11260 | Not Available | Negative | 2477417 - 2478730 | 45783.8 |
| helix-turn-helix domain-containing protein | SWIT_RS11265 | Not Available | Negative | 2478870 - 2479883 | 37531.3 |
| tonb-dependent receptor | SWIT_RS11270 | Not Available | Positive | 2480111 - 2482423 | 82801.6 |
| pqq-dependent dehydrogenase, methanol/ethanol family | SWIT_RS11275 | Not Available | Positive | 2482495 - 2484612 | 76488.5 |
| glcg/hbps family heme-binding protein | SWIT_RS11280 | Not Available | Positive | 2484710 - 2485192 | 15950.4 |
| hypothetical protein | SWIT_RS11285 | Not Available | Negative | 2485205 - 2485399 | 6616.18 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
