Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | SWIT_RS10840 | Not Available | Negative | 2407963 - 2408670 | 25753.2 |
| ef-hand domain-containing protein | SWIT_RS10845 | Not Available | Negative | 2408667 - 2409377 | 25680.3 |
| abc transporter permease | SWIT_RS10850 | Not Available | Negative | 2409374 - 2410582 | 43468.2 |
| abc transporter atp-binding protein | SWIT_RS10855 | Not Available | Negative | 2410716 - 2411444 | 26284.6 |
| efflux rnd transporter periplasmic adaptor subunit | SWIT_RS10860 | Not Available | Negative | 2411434 - 2412849 | 48627.1 |
| efflux transporter outer membrane subunit | SWIT_RS10865 | Not Available | Negative | 2412849 - 2414354 | 52773.8 |
| retroviral-like aspartic protease family protein | SWIT_RS10870 | Not Available | Positive | 2414594 - 2415571 | 34769.4 |
| peroxiredoxin | SWIT_RS10875 | Not Available | Positive | 2415647 - 2416198 | 19128.4 |
| hypothetical protein | SWIT_RS10880 | Not Available | Positive | 2416201 - 2416866 | 23932.7 |
| llm class flavin-dependent oxidoreductase | SWIT_RS10885 | Not Available | Positive | 2417203 - 2418237 | 37552.9 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
