Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybgc/fadm family acyl-coa thioesterase | SWIT_RS10790 | Not Available | Negative | 2396720 - 2397163 | 16794.2 |
| holliday junction branch migration dna helicase ruvb | SWIT_RS10795 | Not Available | Negative | 2397312 - 2398340 | 37509.3 |
| tetratricopeptide repeat protein | SWIT_RS10800 | Not Available | Negative | 2398407 - 2400413 | 72539.8 |
| holliday junction branch migration protein ruva | SWIT_RS10805 | Not Available | Negative | 2400425 - 2401024 | 19973.3 |
| crossover junction endodeoxyribonuclease ruvc | SWIT_RS10810 | Not Available | Negative | 2401021 - 2401518 | 17158.9 |
| yebc/pmpr family dna-binding transcriptional regulator | SWIT_RS10815 | Not Available | Negative | 2401644 - 2402387 | 26350.0 |
| dihydrolipoamide acetyltransferase family protein | SWIT_RS10820 | Not Available | Negative | 2402558 - 2403847 | 45342.4 |
| alpha-ketoacid dehydrogenase subunit beta | SWIT_RS10825 | Not Available | Negative | 2403854 - 2404858 | 36802.9 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | SWIT_RS10830 | Not Available | Negative | 2405007 - 2406266 | 46284.7 |
| atp-binding protein | SWIT_RS10835 | Not Available | Negative | 2406536 - 2407966 | 52049.3 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
