Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SWIT_RS10690 | Not Available | Positive | 2378232 - 2378417 | 6769.15 |
| chat domain-containing tetratricopeptide repeat protein | SWIT_RS10695 | Not Available | Negative | 2378486 - 2381563 | 106334.0 |
| m48 family metalloprotease | SWIT_RS10700 | Not Available | Negative | 2381569 - 2383392 | 63577.9 |
| hypothetical protein | SWIT_RS10705 | Not Available | Negative | 2383432 - 2383809 | 12720.6 |
| tonb-dependent receptor | SWIT_RS10710 | Not Available | Positive | 2384156 - 2385052 | 31365.8 |
| dmt family transporter | SWIT_RS10715 | Not Available | Negative | 2385072 - 2385389 | 11162.1 |
| duf1345 domain-containing protein | SWIT_RS10720 | Not Available | Positive | 2385436 - 2386080 | 23051.4 |
| gnat family n-acetyltransferase | SWIT_RS10725 | Not Available | Negative | 2386252 - 2386731 | 17652.9 |
| dmt family transporter | SWIT_RS10730 | Not Available | Negative | 2386728 - 2387615 | 31336.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SWIT_RS10735 | Not Available | Negative | 2387659 - 2388783 | 39615.6 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
