Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2188 domain-containing protein | SWIT_RS00970 | Not Available | Negative | 186280 - 186516 | 8597.98 |
| wyl domain-containing protein | SWIT_RS00975 | Not Available | Positive | 186619 - 187482 | 33111.7 |
| helicase-related protein | SWIT_RS00980 | Not Available | Positive | 187508 - 191011 | 132244.0 |
| sacsin n-terminal atp-binding-like domain-containing protein | SWIT_RS00985 | Not Available | Positive | 191049 - 195293 | 156905.0 |
| duf1156 domain-containing protein | SWIT_RS00990 | Not Available | Positive | 195277 - 198078 | 102469.0 |
| duf499 domain-containing protein | SWIT_RS00995 | Not Available | Positive | 198092 - 201388 | 121774.0 |
| toll/interleukin-1 receptor domain-containing protein | SWIT_RS01000 | Not Available | Positive | 201391 - 202764 | 51169.4 |
| argonaute/piwi family protein | SWIT_RS01005 | Not Available | Positive | 202761 - 204317 | 57410.7 |
| Trna-arg | Not Available | Not Available | Positive | 204481 - 204557 | Not Available |
| hypothetical protein | SWIT_RS01015 | Not Available | Negative | 204785 - 205120 | 12070.5 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
