Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | SWIT_RS10145 | Not Available | Positive | 2247831 - 2248331 | 18124.7 |
| ethd domain-containing protein | SWIT_RS10150 | Not Available | Positive | 2248328 - 2248705 | 13695.3 |
| alpha/beta hydrolase | SWIT_RS10155 | Not Available | Negative | 2248702 - 2249709 | 36605.0 |
| mfs transporter | SWIT_RS10160 | Not Available | Negative | 2249926 - 2251266 | 46174.2 |
| flavin-containing monooxygenase | SWIT_RS10165 | Not Available | Negative | 2251263 - 2253218 | 73648.4 |
| n-acyl-d-amino-acid deacylase family protein | SWIT_RS10170 | Not Available | Positive | 2253443 - 2255143 | 60643.4 |
| mfs transporter | SWIT_RS10175 | Not Available | Positive | 2255145 - 2256524 | 49539.2 |
| zn-ribbon domain-containing ob-fold protein | SWIT_RS10180 | Not Available | Positive | 2256533 - 2256943 | 14563.5 |
| lipid-transfer protein | SWIT_RS10185 | Not Available | Positive | 2256940 - 2258106 | 40671.7 |
| tyrosine-protein phosphatase | SWIT_RS10190 | Not Available | Negative | 2258114 - 2258956 | 30656.7 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
