Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc metalloprotease htpx | SWIT_RS09800 | Not Available | Positive | 2172603 - 2173553 | 33196.5 |
| rsmb/nop family class i sam-dependent rna methyltransferase | SWIT_RS09805 | Not Available | Positive | 2173608 - 2174879 | 44013.5 |
| ribulose-phosphate 3-epimerase | SWIT_RS09810 | Not Available | Positive | 2175061 - 2175723 | 23184.1 |
| heparinase ii/iii family protein | SWIT_RS09815 | Not Available | Positive | 2175734 - 2177461 | 61863.0 |
| glycine cleavage system protein r | SWIT_RS09820 | Not Available | Positive | 2177544 - 2178071 | 18154.7 |
| tetr family transcriptional regulator | SWIT_RS09825 | Not Available | Negative | 2178193 - 2179407 | 44380.5 |
| crp/fnr family transcriptional regulator | SWIT_RS09830 | Not Available | Positive | 2179566 - 2180294 | 25763.2 |
| nuclear transport factor 2 family protein | SWIT_RS09835 | Not Available | Positive | 2180386 - 2180880 | 18775.4 |
| voc family protein | SWIT_RS09840 | Not Available | Positive | 2180877 - 2181320 | 15682.7 |
| mfs transporter | SWIT_RS09845 | Not Available | Positive | 2181496 - 2183166 | 59177.4 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
