Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abcb family abc transporter atp-binding protein/permease | SWIT_RS09655 | Not Available | Positive | 2144270 - 2146084 | 66296.5 |
| acyltransferase family protein | SWIT_RS09660 | Not Available | Positive | 2146285 - 2147355 | 39343.3 |
| dna helicase recq | SWIT_RS09665 | Not Available | Positive | 2147412 - 2149178 | 64012.7 |
| tigr01244 family sulfur transferase | SWIT_RS09670 | Not Available | Positive | 2149192 - 2149608 | 14409.0 |
| endonuclease/exonuclease/phosphatase family protein | SWIT_RS09675 | Not Available | Negative | 2149773 - 2150465 | 26050.7 |
| ammonium transporter | SWIT_RS09680 | Not Available | Negative | 2150616 - 2151965 | 46111.1 |
| p-ii family nitrogen regulator | SWIT_RS09685 | Not Available | Negative | 2151980 - 2152318 | 12153.7 |
| duf924 family protein | SWIT_RS09690 | Not Available | Negative | 2152485 - 2153036 | 20898.4 |
| patatin-like phospholipase family protein | SWIT_RS09695 | Not Available | Negative | 2153033 - 2153866 | 29551.4 |
| metalloprotease tldd | SWIT_RS09700 | Not Available | Negative | 2153894 - 2155324 | 50495.8 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
