Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | SWIT_RS09205 | Not Available | Positive | 2039448 - 2040377 | 33884.8 |
| dipeptide epimerase | SWIT_RS09210 | Not Available | Positive | 2040495 - 2041559 | 37798.6 |
| m28 family peptidase | SWIT_RS09215 | Not Available | Positive | 2041547 - 2043151 | 56744.6 |
| tetr/acrr family transcriptional regulator | SWIT_RS09220 | Not Available | Negative | 2043136 - 2043720 | 21851.2 |
| voc family protein | SWIT_RS09225 | Not Available | Negative | 2043894 - 2044793 | 32288.4 |
| alpha/beta fold hydrolase | SWIT_RS09230 | Not Available | Negative | 2044790 - 2045647 | 30691.1 |
| acyl-coa dehydrogenase | SWIT_RS09235 | Not Available | Negative | 2045666 - 2046835 | 42308.4 |
| rieske 2fe-2s domain-containing protein | SWIT_RS09240 | Not Available | Negative | 2046849 - 2047946 | 41185.2 |
| fad-dependent oxidoreductase | SWIT_RS09245 | Not Available | Negative | 2047993 - 2049756 | 62419.8 |
| enoyl-coa hydratase-related protein | SWIT_RS09250 | Not Available | Positive | 2049943 - 2050866 | 33414.4 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
