Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-formylglutamate amidohydrolase | SWIT_RS00685 | Not Available | Positive | 130704 - 131564 | 30629.2 |
| sapc family protein | SWIT_RS00690 | Not Available | Negative | 131983 - 132759 | 28598.4 |
| fad-binding oxidoreductase | SWIT_RS00695 | Not Available | Negative | 132825 - 134282 | 50710.9 |
| hypothetical protein | SWIT_RS00700 | Not Available | Positive | 134583 - 134927 | 12681.5 |
| dead/deah box helicase | SWIT_RS00705 | Not Available | Positive | 135024 - 136370 | 49047.1 |
| m20/m25/m40 family metallo-hydrolase | SWIT_RS00710 | Not Available | Negative | 136546 - 137952 | 49373.5 |
| phospholipase d-like domain-containing protein | SWIT_RS00715 | Not Available | Negative | 138007 - 139569 | 59047.7 |
| oligosaccharide flippase family protein | SWIT_RS00720 | Not Available | Negative | 139682 - 141109 | 49955.1 |
| 2og-fe(ii) oxygenase | SWIT_RS00725 | Not Available | Negative | 141195 - 141866 | 24768.2 |
| glutathione s-transferase family protein | SWIT_RS00730 | Not Available | Negative | 141897 - 142508 | 22121.6 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
