Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit a | SWIT_RS00540 | Not Available | Positive | 102767 - 105019 | 82674.5 |
| eal domain-containing protein | SWIT_RS00545 | Not Available | Positive | 105146 - 106864 | 62099.9 |
| cca trna nucleotidyltransferase | SWIT_RS00550 | Not Available | Negative | 106840 - 108045 | 42812.6 |
| coa pyrophosphatase | SWIT_RS00555 | Not Available | Negative | 108042 - 108647 | 21943.3 |
| duf1285 domain-containing protein | SWIT_RS00560 | Not Available | Negative | 108644 - 109219 | 20875.8 |
| gnat family n-acetyltransferase | SWIT_RS00565 | Not Available | Negative | 109235 - 109762 | 18766.6 |
| glutathione s-transferase family protein | SWIT_RS00570 | Not Available | Positive | 109870 - 110505 | 23533.1 |
| sdr family oxidoreductase | SWIT_RS00575 | Not Available | Positive | 110628 - 111389 | 26514.9 |
| dihydroneopterin aldolase | SWIT_RS00580 | Not Available | Positive | 111410 - 111808 | 14669.5 |
| hypothetical protein | SWIT_RS00585 | Not Available | Negative | 111851 - 112735 | 31438.0 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
