Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase family protein | SWIT_RS00495 | Not Available | Negative | 92121 - 93518 | 48759.8 |
| paai family thioesterase | SWIT_RS00500 | Not Available | Negative | 93521 - 93907 | 14021.0 |
| paai family thioesterase | SWIT_RS00505 | Not Available | Negative | 93907 - 94326 | 14860.8 |
| potassium transporter kup | SWIT_RS00510 | Not Available | Negative | 94528 - 96474 | 69848.7 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | SWIT_RS00515 | Not Available | Positive | 96679 - 97455 | 29450.5 |
| rbbp9/yden family alpha/beta hydrolase | SWIT_RS00520 | Not Available | Positive | 97623 - 98303 | 24223.6 |
| ferredoxin--nadp reductase | SWIT_RS00525 | Not Available | Positive | 98532 - 99341 | 30022.1 |
| m61 family metallopeptidase | SWIT_RS00530 | Not Available | Negative | 99465 - 101393 | 71773.0 |
| hypothetical protein | SWIT_RS28580 | Not Available | Negative | 101451 - 101624 | 6736.18 |
| lysr substrate-binding domain-containing protein | SWIT_RS00535 | Not Available | Positive | 101719 - 102603 | 32326.9 |
Pathways
1344 pathways
Health Effects
No health effects information available for this bacterium.
