Vibrio campbellii strain VIB391

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain VIB391 is a gram-negative bacterium predominantly found in marine habitats, specifically within the Changjiang estuary and other coastal sites. This strain thrives optimally at a temperature of 35°C, indicating its adaptation to warm marine environments. VIB391 is characterized by having a single replicon, which contributes to its genetic stability and adaptability within its ecological niche. The bacterium has been identified to interact with various hosts, including members of the phylum Mollusca and the brine shrimp species Artemia sp. These interactions suggest that V. campbellii may play significant roles in marine ecosystems, particularly in nutrient cycling and microbial dynamics. The accession number for this strain is MNLF00000000.1, which provides a reference point for further genetic and ecological studies. Understanding the specific ecological roles of V. campbellii strain VIB391 can shed light on its contributions to marine microbiomes, including its potential effects on host organisms and the overall health of coastal ecosystems. The presence of this bacterium in estuarine environments highlights the importance of microbial diversity in supporting marine life and maintaining ecological balance in coastal waters.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain VIB391

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain VIB391
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain VIB391 contig82, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5087 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
paraquat-inducible membrane protein aBK412_21965Not AvailablePositive4893874 - 489509745823.1
paraquat-inducible protein bBK412_21970Not AvailablePositive4895090 - 489774496026.9
16s rrna (cytosine(1407)-c(5))-methyltransferase rsmfBK412_21975Not AvailablePositive4897879 - 489931553518.0
gntr family transcriptional regulatorBK412_21980Not AvailableNegative4899663 - 490049630767.3
hypothetical proteinBK412_21985Not AvailablePositive4900680 - 490203252811.2
duf4442 domain-containing proteinBK412_21990Not AvailableNegative4902055 - 490254618124.3
3-deoxy-7-phosphoheptulonate synthaseBK412_21995Not AvailablePositive4902944 - 490399638614.1
yajq family cyclic di-gmp-binding proteinBK412_22000Not AvailablePositive4904029 - 490451118134.6
siroheme synthaseBK412_22005Not AvailableNegative4904621 - 490554134692.8
amino acid abc transporter substrate-binding proteinBK412_22010Not AvailablePositive4906003 - 490703136772.7

Displaying genes 4341 – 4350 of 5161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.