Vibrio campbellii ATCC BAA-1116

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii ATCC BAA-1116 is a Gram-negative bacterium known for its optimal growth temperature of 35°C. This species is of particular interest due to its unique genomic structure, possessing three replicons, which may contribute to its adaptability in various environments. The strain is documented in several accession numbers, specifically NC_009783.1, NC_009777.1, and NC_009784.1, facilitating its identification and study in genomic databases. Vibrio campbellii is associated with marine environments and is often found in association with marine organisms. Its ability to thrive at higher temperatures highlights its potential role in marine ecosystems, where temperature fluctuations can significantly impact microbial populations. The presence of multiple replicons suggests a level of genetic complexity that may enhance its survival and adaptability in diverse ecological niches. Research on Vibrio campbellii contributes to our understanding of microbial behavior in aquatic systems, particularly in relation to its interactions with other marine life and its role in nutrient cycling. This bacterium's traits underscore the importance of studying marine microorganisms, as they can provide insights into microbial ecology, environmental resilience, and the potential impacts of climate change on marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
StrainATCC BAA-1116

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii ATCC BAA-1116
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii ATCC BAA-1116 chromosome I, complete sequence.

Gene Summary

Adenine Count

1024316 bp

Thymine Count

1026049 bp

Guanine Count

856538 bp

Cytosine Count

858448 bp

Genome Length

3765351 bp

Protein-coding Genes

3292 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Isppu15, transposase orf2VIBHAR_RS09095Not AvailableNegative1947423 - 194896758310.1
AttlNot AvailableNot AvailablePositive1948845 - 1948859Not Available
Isppu15, transposase orf1VIBHAR_RS09100Not AvailableNegative1949028 - 194938113739.7
is66 family insertion sequence element accessory protein tnpaVIBHAR_RS09105Not AvailableNegative1949378 - 194968911405.6
hypothetical proteinVIBHAR_RS09110Not AvailableNegative1949741 - 195001310589.5
restriction endonucleaseVIBHAR_RS09115Not AvailableNegative1950551 - 195156438159.1
Putative transposase orfbVIBHAR_RS09120Not AvailableNegative1951922 - 195304543434.1
Putative bacteriophage integraseVIBHAR_RS09130Not AvailableNegative1953256 - 195449147248.3
excisionase family proteinVIBHAR_RS09135Not AvailableNegative1954491 - 19547218846.48
hypothetical proteinVIBHAR_RS09140Not AvailableNegative1954909 - 19551217649.05

Displaying genes 1 – 10 of 5624 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

90 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da

Displaying 1–10 of 90 metabolites

Health Effects

No health effects information available for this bacterium.